BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024C11LP1|AL428196
(1001 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1161 1917 0.0
>3x_Contig1161
Length = 5308
Score = 1917 bits (963), Expect = 0.0
Identities = 991/1001 (99%), Gaps = 2/1001 (0%)
Strand = Plus / Plus
Query: 1 ctaactcaagatcttttgtcgatgaaagatagaagatgcatctttaaaccagccccaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1672 ctaactcaagatcttttgtcgatgaaagatagaagatgcatctttaaaccagccccaaag 1731
Query: 61 aaaaaatcagagctttatctaaggccagaaagaagatgcccaaaattcgagtttggaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1732 aaaaaatcagagctttatctaaggccagaaagaagatgcccaaaattcgagtttggaatt 1791
Query: 121 cggtcggaagataatgttatcaacgtaacgttccaaggtgggttcatcagaaataccatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1792 cggtcggaagataatgttatcaacgtaacgttccaaggtgggttcatcagaaataccatc 1851
Query: 181 atggattggtatttccccagtgacagcgctcttccttctaattttcaagatgtgacaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1852 atggattggtatttccccagtgacagcgctcttccttctaattttcaagatgtgacaatc 1911
Query: 241 gaatacgatcatgattattacgctaaaatgttgaaccatataaatacccaaatcgctatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1912 gaatacgatcatgattattacgctaaaatgttgaaccatataaatacccaaatcgctatg 1971
Query: 301 caaaatgaccccaacatttcaagtttcaggacatattggaaaatcttgaagtgtcaaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1972 caaaatgaccccaacatttcaagtttcaggacatattggaaaatcttgaagtgtcaaact 2031
Query: 361 gggccacatatcaaattgcagttcatttctgaaacattagattgcgatgttaatttttcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2032 gggccacatatcaaattgcagttcatttctgaaacattagattgcgatgttaatttttcg 2091
Query: 421 aacacccaatattattttwacattgtgtcgagaatcgtcagacctaaaagtttcggccca 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2092 aacacccaatattattttaacattgtgtcgagaatcgtcagacctaaaagtttcggccca 2151
Query: 481 atagaaagcggtgctaggtatagggccaagatggtgaatgacatgaaatcggacgatagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2152 atagaaagcggtgctaggtatagggccaagatggtgaatgacatgaaatcggacgatagt 2211
Query: 541 tctggcaagccgagatggtgtcattttatcaccagtgctgagatgaaggggattttagat 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2212 actggcaagccgagatggtgtcattttatcaccagtgctgagatgaaggggattttagat 2271
Query: 601 ttcatctttgatggtcttgattacatagctaatgatgacactttgccagataaattatcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2272 ttcatctttgatggtcttgattacatagctaatgatgacactttgccagataaattatcc 2331
Query: 661 aaaggtataaaaccaaatccgttcaagcagcatgaatctaggataagatctcatatggtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2332 aaaggtataaaaccaaatccgttcaagcagcatgaatctaggataagatctcatatggtg 2391
Query: 721 gggtatgtttccggtaaaaaatgtatgawagatgctaagaatgtwctaactggtgaaagg 780
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 2392 gggtatgtttccggtaaaaaatgtatgaaagatgctaagaatgtactaactggtgaaagg 2451
Query: 781 aaagtctttgccgaggaaatgtataagcaggtcatcggatatgacgataaaaggagaccg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2452 aaagtctttgccgaggaaatgtataagcaggtcatcggatatgacgataaaaggagaccg 2511
Query: 841 tataacactttgaaggaatttgctgttatggaggttaaatatatkatggacaacattgaa 900
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2512 tataacactttgaaggaatttgctgttatggaggttaaatatatgatggacaacattgaa 2571
Query: 901 gatttgtttkggaaaattctattgggtcgatcccggaactgtgccccccggagggtataa 960
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2572 gatttgttt-ggaaaattctattgggtcgatcccggaactgtgcccaccggagggtataa 2630
Query: 961 agtcccgcctctgaggtgttgtgtcatawtttcactaccgt 1001
||| |||| ||||||||||||||||||| ||||||||||||
Sbjct: 2631 agt-ccgcttctgaggtgttgtgtcatattttcactaccgt 2670
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6970
Number of Sequences: 1807
Number of extensions: 6970
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 1001
length of database: 10,358,551
effective HSP length: 16
effective length of query: 985
effective length of database: 10,329,639
effective search space: 10174694415
effective search space used: 10174694415
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)